| 1 | Intro |
| 2 | Title |
| 3 | File Select |
| 4 | Personality Test |
| 5 | Awakening |
| 6 | There's Trouble! |
| 7 | Tiny Woods |
| 8 | At the End of the Road |
| 9 | Happiness |
| 10 | Rescue Team Base |
| 11 | Insert Title |
| 12 | Thunderwave Cave |
| 13 | Dream |
| 14 | Pokemon Plaza |
| 15 | Friend Area ~ Field |
| 16 | Friend Area ~ Steppe |
| 17 | Friend Area ~ Forest |
| 18 | Friend Area ~ Wilds |
| 19 | Friend Area ~ Swamp |
| 20 | Friend Area ~ Pond |
| 21 | Mt. Steel |
| 22 | Versus Boss |
| 23 | Friend Area ~ Lab |
| 24 | Makuhita Dojo |
| 25 | Sinister Woods |
| 26 | Danger |
| 27 | Silent Chasm |
| 28 | Mt. Thunder |
| 29 | Mt. Thunder Peak |
| 30 | Great Canyon |
| 31 | The Legend of Ninetales |
| 32 | Run Away |
| 33 | Lapis Cave |
| 34 | The Mountain of Fire |
| 35 | Mt. Blaze |
| 36 | Kecleon Shop |
| 37 | Stop! Thief! |
| 38 | Mt. Blaze Peak |
| 39 | Escape Through the Snow |
| 40 | Frosty Forest |
| 41 | Frosty Grotto |
| 42 | Benevolent Spirit |
| 43 | Mt. Freeze |
| 44 | Mt. Freeze Peak |
| 45 | Magma Cavern |
| 46 | Monster House! |
| 47 | Magma Cavern Pit |
| 48 | World Calamity |
| 49 | Dream Eater |
| 50 | Sky Tower |
| 51 | Sky Tower Summit |
| 52 | Rayquaza's Domain |
| 53 | Versus Legendary |
| 54 | The Other Side |
| 55 | Farewell |
| 56 | Staff Roll |
| 57 | Time of Reunion |
| 58 | Friend Area ~ Oceanic |
| 59 | Friend Area ~ Rainbow Peak |
| 60 | Friend Area ~ Caves |
| 61 | Friend Area ~ Cryptic Cave |
| 62 | Friend Area ~ Southern Island |
| 63 | Friend Area ~ Final Island |
| 64 | Stormy Sea |
| 65 | Buried Relic |
| 66 | Friend Area ~ Legendary Island |
| 67 | Friend Area ~ Deep-Sea Current |
| 68 | Friend Area ~ Healing Forest |
| 69 | Friend Area ~ Seafloor Cave |
| 70 | Friend Area ~ Volcanic Pit |
| 71 | Friend Area ~ Stratos Lookout |
| 72 | Friend Area ~ Enclosed Island |
| 73 | SFX Collection (Dungeon Notice ~ Level Up! ~ Get New Move ~ Mission Accomplished ~ Mission Failed ~ Reward ~ Get Special Item ~ Rank Up! ~ New Dungeon ~ Get Friend Area ~ New Member Joins ~ Bye-Bye) |
| 74 | Unused 1 |
| 75 | Unused 2 |
